Clostridiaceae bacterium AF02-42

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF02-42 is characterized by having a single replicon, indicating a streamlined genomic organization typical of certain bacterial species. The strain is cataloged under the accession number QWGK00000000.1, which serves as a unique identifier for its genomic data in biological databases. The Clostridiaceae family is known for its anaerobic bacteria, which play significant roles in various ecological and biological processes, particularly in the degradation of organic matter. Although specific metabolic capabilities of Clostridiaceae bacterium AF02-42 are not detailed here, members of this family are generally involved in fermentation processes and can contribute to nutrient cycling in their environments. The presence of a single replicon may suggest adaptations that allow for efficient replication and maintenance of genetic material, which can be advantageous in specific ecological niches, particularly those where resources are limited. Understanding the genomic structure of Clostridiaceae bacterium AF02-42 can provide insights into its potential ecological roles and interactions within microbial communities. In summary, the genomic simplicity indicated by a single replicon, along with the taxonomic affiliation to the Clostridiaceae family, underlines the potential ecological significance of Clostridiaceae bacterium AF02-42 in anaerobic environments and its role in microbial processes such as organic matter decomposition.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF02-42 AF02-42.Scaf85, whole genome

Gene Summary

Adenine Count

984549 bp

Thymine Count

950417 bp

Guanine Count

915726 bp

Cytosine Count

880392 bp

Genome Length

3732153 bp

Protein-coding Genes

3280 genes

Non-Coding Genes

270 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoprenyl transferaseDWV19_03695Not AvailablePositive769920 - 77064827815.6
phosphatidate cytidylyltransferaseDWV19_03700Not AvailablePositive770660 - 77146329302.7
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDWV19_03705Not AvailablePositive771478 - 77262642262.4
pdz domain-containing proteinDWV19_03710Not AvailablePositive772874 - 77394439323.3
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDWV19_03715Not AvailablePositive773986 - 77505037881.5
polc-type dna polymerase iiiDWV19_03720Not AvailablePositive775053 - 779753174564.0
cysteine hydrolaseDWV19_03725Not AvailableNegative780230 - 78081121547.8
ecf transporter s componentDWV19_03730Not AvailablePositive781380 - 78198220816.1
energy-coupling factor transporter transmembrane protein ecftDWV19_03735Not AvailablePositive782041 - 78281728940.5
abc transporter atp-binding proteinDWV19_03740Not AvailablePositive782805 - 78450562735.1

Displaying genes 911 – 920 of 3550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.