Pseudotabrizicola alkalilacus strain DJC

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudotabrizicola

Description

Pseudotabrizicola alkalilacus strain DJC is characterized by possessing a single replicon. This trait is significant as it suggests a streamlined genomic organization, which can impact the organism's metabolic capabilities and adaptability to various environments. The strain's genome is accessible under the accession number QWEY00000000.1, providing a resource for further genomic analysis and research. The characteristics of Pseudotabrizicola alkalilacus strain DJC position it within a unique ecological niche, likely adapting to alkaline conditions given its specific designation in the genus Pseudotabrizicola. This adaptation may influence its interactions within microbial communities and its potential roles in biogeochemical cycles, particularly in alkaline environments. Such environments can include alkaline lakes or soils, where specialized microbial life forms thrive. In summary, the genomic structure of Pseudotabrizicola alkalilacus strain DJC, defined by its single replicon and documented genomic data, suggests a specialization that may enhance its survival and functionality in alkaline ecosystems. Further research into its metabolic pathways and ecological interactions could provide valuable insights into microbial life in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudotabrizicola
SpeciesPseudotabrizicola alkalilacus
Strainstrain DJC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudotabrizicola alkalilacus strain DJC DJC_scaffold110, whole

Gene Summary

Adenine Count

856332 bp

Thymine Count

855859 bp

Guanine Count

1442116 bp

Cytosine Count

1455754 bp

Genome Length

4610061 bp

Protein-coding Genes

4266 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family oxidoreductaseD1012_03680Not AvailableNegative755450 - 75656839589.1
sugar phosphate isomerase/epimeraseD1012_03685Not AvailableNegative756687 - 75774239329.0
laci family dna-binding transcriptional regulatorD1012_03690Not AvailableNegative757739 - 75881238859.0
carbohydrate abc transporter substrate-binding proteinD1012_03695Not AvailablePositive759123 - 76035242980.8
sugar abc transporter permeaseD1012_03700Not AvailablePositive760426 - 76131933511.7
carbohydrate abc transporter permeaseD1012_03705Not AvailablePositive761312 - 76222933956.6
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcD1012_03710Not AvailablePositive762236 - 76331538894.6
sugar phosphate isomerase/epimeraseD1012_03715Not AvailablePositive763438 - 76418727577.4
gfo/idh/moca family oxidoreductaseD1012_03720Not AvailablePositive764191 - 76532440144.1
glycoside hydrolase family 43 proteinD1012_03725Not AvailablePositive765478 - 76704958550.1

Displaying genes 851 – 860 of 4390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.