Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stk1 family pasta domain-containing ser/thr kinase | DZF93_00140 | Not Available | Negative | 24987 - 26729 | 61067.3 |
| serine/threonine protein kinase | DZF93_00145 | Not Available | Negative | 26864 - 28771 | 65037.5 |
| penicillin-binding protein 2 | DZF93_00150 | Not Available | Negative | 28768 - 30219 | 50110.1 |
| ftsw/roda/spove family cell cycle protein | DZF93_00155 | Not Available | Negative | 30216 - 31613 | 49538.1 |
| serine/threonine-protein phosphatase | DZF93_00160 | Not Available | Negative | 31606 - 32868 | 45100.2 |
| fha domain-containing protein | DZF93_00165 | Not Available | Negative | 32873 - 33457 | 20827.9 |
| duf2662 domain-containing protein | DZF93_00170 | Not Available | Negative | 33454 - 34185 | 26175.8 |
| Trna-leu | Not Available | Not Available | Positive | 34362 - 34448 | Not Available |
| 5-deoxy-glucuronate isomerase | DZF93_00180 | Not Available | Positive | 34739 - 35698 | 34799.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | DZF93_00185 | Not Available | Positive | 35695 - 37611 | 68146.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
