Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_05015 | Not Available | Positive | 981523 - 981873 | 12325.7 |
| hypothetical protein | DZF93_05020 | Not Available | Positive | 981875 - 982117 | 8636.25 |
| hypothetical protein | DZF93_05025 | Not Available | Negative | 982264 - 982605 | 12675.9 |
| type iv secretion protein rhs | DZF93_05030 | Not Available | Negative | 982958 - 984370 | 49263.3 |
| ribonuclease j | DZF93_05035 | Not Available | Negative | 984384 - 986060 | 60818.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DZF93_05040 | Not Available | Negative | 986120 - 987103 | 34438.2 |
| fad-dependent thymidylate synthase | DZF93_05045 | Not Available | Negative | 987137 - 987928 | 30124.6 |
| tigr01777 family protein | DZF93_05050 | Not Available | Positive | 988025 - 988945 | 32590.0 |
| glycosyltransferase | DZF93_05055 | Not Available | Positive | 989034 - 989800 | 26770.9 |
| succinate dehydrogenase, cytochrome b556 subunit | DZF93_05060 | Not Available | Positive | 989979 - 990377 | 14838.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
