Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DZF93_04515 | Not Available | Negative | 890713 - 891813 | 39264.1 |
| hypothetical protein | DZF93_04520 | Not Available | Positive | 892131 - 893048 | 31868.3 |
| Trna-thr | Not Available | Not Available | Positive | 893090 - 893162 | Not Available |
| nitroreductase | DZF93_04530 | Not Available | Negative | 893136 - 893305 | 5954.91 |
| pyridine nucleotide-disulfide oxidoreductase | DZF93_04535 | Not Available | Positive | 893306 - 893692 | 13565.3 |
| duf3618 domain-containing protein | DZF93_04540 | Not Available | Negative | 894000 - 894563 | 19053.0 |
| phage holin family protein | DZF93_04545 | Not Available | Negative | 894560 - 894979 | 14588.8 |
| hypothetical protein | DZF93_04550 | Not Available | Negative | 894976 - 895842 | 28922.7 |
| apc family permease | DZF93_04555 | Not Available | Negative | 895991 - 898051 | 73994.4 |
| mfs transporter | DZF93_04560 | Not Available | Negative | 898314 - 899615 | 44421.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
