Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DZF93_04450 | Not Available | Positive | 878465 - 879322 | 29114.1 |
| carbohydrate abc transporter permease | DZF93_04455 | Not Available | Positive | 879315 - 880247 | 32657.5 |
| 3-hydroxyacyl-coa dehydrogenase | DZF93_04460 | Not Available | Positive | 880355 - 881212 | 30187.7 |
| tetr family transcriptional regulator | DZF93_04470 | Not Available | Negative | 883190 - 883433 | 8019.57 |
| sdr family nad-dependent epimerase/dehydratase | DZF93_04475 | Not Available | Negative | 883434 - 883629 | 6913.36 |
| glycosyltransferase | DZF93_04480 | Not Available | Negative | 883626 - 884657 | 36966.5 |
| glycosyltransferase family 2 protein | DZF93_04485 | Not Available | Negative | 884654 - 885508 | 31113.1 |
| hypothetical protein | DZF93_04490 | Not Available | Positive | 885781 - 887994 | 78529.0 |
| glycosyltransferase | DZF93_04495 | Not Available | Positive | 887991 - 888375 | 13526.2 |
| duf4032 domain-containing protein | DZF93_04510 | Not Available | Negative | 889308 - 890612 | 49062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
