Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DZF93_04335 | Not Available | Negative | 858897 - 859949 | 37312.6 |
| sugar abc transporter substrate-binding protein | DZF93_04340 | Not Available | Positive | 860063 - 861163 | 36819.8 |
| abc transporter permease | DZF93_04345 | Not Available | Positive | 861166 - 862212 | 36085.9 |
| sugar abc transporter atp-binding protein | DZF93_04350 | Not Available | Positive | 862209 - 863006 | 28016.0 |
| antibiotic biosynthesis monooxygenase | DZF93_04355 | Not Available | Positive | 863003 - 863296 | 10737.7 |
| hypothetical protein | DZF93_04360 | Not Available | Positive | 863398 - 864157 | 26004.4 |
| phage holin family protein | DZF93_04365 | Not Available | Negative | 864166 - 864561 | 13848.6 |
| pyridoxal phosphate-dependent aminotransferase | DZF93_04370 | Not Available | Positive | 864632 - 865747 | 39473.1 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | DZF93_04375 | Not Available | Positive | 865757 - 866869 | 40410.8 |
| alpha-ketoacid dehydrogenase subunit beta | DZF93_04380 | Not Available | Positive | 866956 - 867921 | 35001.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
