Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | DZF93_03955 | Not Available | Positive | 797942 - 800843 | 108422.0 |
| recombinase family protein | DZF93_03960 | Not Available | Positive | 800844 - 801071 | 7883.39 |
| hypothetical protein | DZF93_03965 | Not Available | Negative | 801098 - 801298 | 6960.04 |
| hypothetical protein | DZF93_03970 | Not Available | Negative | 801629 - 802003 | 13132.0 |
| duf2945 domain-containing protein | DZF93_03975 | Not Available | Negative | 802371 - 802580 | 7579.72 |
| sdr family oxidoreductase | DZF93_03980 | Not Available | Negative | 802580 - 803377 | 28166.2 |
| dna starvation/stationary phase protection protein | DZF93_03985 | Not Available | Negative | 803499 - 804059 | 20836.2 |
| smp-30/gluconolactonase/lre family protein | DZF93_03990 | Not Available | Positive | 804303 - 805205 | 31999.5 |
| type 1 glutamine amidotransferase | DZF93_03995 | Not Available | Positive | 805259 - 805825 | 20138.4 |
| hypothetical protein | DZF93_04010 | Not Available | Negative | 806386 - 806733 | 12012.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
