Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate--2-oxoglutarate transaminase | DZF93_03800 | Not Available | Negative | 768014 - 769429 | 49161.4 |
| osmc family peroxiredoxin | DZF93_03805 | Not Available | Positive | 769501 - 769986 | 17379.2 |
| peptidylprolyl isomerase | DZF93_03810 | Not Available | Positive | 770116 - 771138 | 33907.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DZF93_03815 | Not Available | Positive | 771147 - 772229 | 38225.6 |
| hypothetical protein | DZF93_03820 | Not Available | Negative | 772416 - 772956 | 17574.7 |
| pyruvate carboxylase | DZF93_03825 | Not Available | Positive | 772957 - 774094 | 40230.8 |
| mycothione reductase | DZF93_03830 | Not Available | Positive | 774110 - 775582 | 51718.7 |
| peptide deformylase | DZF93_03835 | Not Available | Positive | 775617 - 776108 | 18134.7 |
| long-chain fatty acid--coa ligase | DZF93_03840 | Not Available | Negative | 776152 - 777978 | 65654.6 |
| rok family protein | DZF93_03845 | Not Available | Positive | 778110 - 778586 | 16494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
