Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DZF93_03485 | Not Available | Positive | 703216 - 703875 | 24863.1 |
| mycothiol system anti-sigma-r factor | DZF93_03490 | Not Available | Positive | 703872 - 704114 | 9088.75 |
| gnat family n-acetyltransferase | DZF93_03495 | Not Available | Positive | 704150 - 704590 | 15900.9 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | DZF93_03500 | Not Available | Negative | 704693 - 708191 | 128646.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DZF93_03505 | Not Available | Negative | 708192 - 709620 | 52181.9 |
| recx family transcriptional regulator | DZF93_03510 | Not Available | Negative | 709671 - 710243 | 21776.8 |
| recombinase reca | DZF93_03515 | Not Available | Negative | 710841 - 711929 | 38380.0 |
| duf3046 domain-containing protein | DZF93_03520 | Not Available | Negative | 712211 - 712444 | 8255.94 |
| xre family transcriptional regulator | DZF93_03525 | Not Available | Negative | 712521 - 712829 | 11048.3 |
| cina family protein | DZF93_03530 | Not Available | Negative | 712969 - 713490 | 17242.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
