Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | DZF93_02785 | Not Available | Positive | 577457 - 577984 | 18725.9 |
| sugar abc transporter substrate-binding protein | DZF93_02790 | Not Available | Negative | 578079 - 579206 | 39449.3 |
| l-arabinose isomerase | DZF93_02795 | Not Available | Negative | 579283 - 580800 | 55745.4 |
| l-ribulose-5-phosphate 4-epimerase | DZF93_02800 | Not Available | Negative | 580797 - 581507 | 25047.8 |
| ribulokinase | DZF93_02805 | Not Available | Negative | 581504 - 583207 | 60255.1 |
| laci family dna-binding transcriptional regulator | DZF93_02810 | Not Available | Negative | 583398 - 584420 | 36674.6 |
| ribonuclease hi | DZF93_02815 | Not Available | Positive | 584598 - 585136 | 19232.3 |
| hypothetical protein | DZF93_02820 | Not Available | Negative | 585137 - 585460 | 10884.5 |
| arsr family transcriptional regulator | DZF93_02825 | Not Available | Positive | 585705 - 586007 | 11432.7 |
| partitioning protein | DZF93_02835 | Not Available | Negative | 588298 - 588576 | 10064.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
