Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpc | DZF93_02715 | Not Available | Positive | 562197 - 562805 | 20597.8 |
| histidine kinase | DZF93_02720 | Not Available | Positive | 562838 - 563601 | 27985.6 |
| hypothetical protein | DZF93_02725 | Not Available | Negative | 563602 - 564190 | 22541.4 |
| tetr/acrr family transcriptional regulator | DZF93_02750 | Not Available | Positive | 568656 - 569345 | 24556.3 |
| dienelactone hydrolase | DZF93_02755 | Not Available | Negative | 570150 - 570740 | 20575.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DZF93_02760 | Not Available | Positive | 570826 - 572153 | 47314.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DZF93_02765 | Not Available | Positive | 572155 - 573564 | 49621.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DZF93_02770 | Not Available | Positive | 573558 - 574667 | 39678.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DZF93_02775 | Not Available | Positive | 574670 - 576214 | 54788.6 |
| putative lipid ii flippase ftsw | DZF93_02780 | Not Available | Positive | 576171 - 577460 | 45495.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
