Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | DZF93_02560 | Not Available | Negative | 530976 - 532394 | 52548.3 |
| heme a synthase | DZF93_02565 | Not Available | Positive | 532661 - 533671 | 35499.0 |
| hypothetical protein | DZF93_02570 | Not Available | Negative | 533830 - 534471 | 21787.9 |
| hypothetical protein | DZF93_02575 | Not Available | Negative | 534720 - 535052 | 11002.3 |
| glycogen debranching enzyme glgx | DZF93_02580 | Not Available | Positive | 535257 - 537461 | 82144.5 |
| malto-oligosyltrehalose synthase | DZF93_02585 | Not Available | Positive | 537458 - 539809 | 85291.0 |
| malto-oligosyltrehalose trehalohydrolase | DZF93_02590 | Not Available | Positive | 539806 - 541560 | 64242.7 |
| flavin reductase | DZF93_02595 | Not Available | Positive | 541561 - 541772 | 7358.79 |
| dna polymerase iii subunit alpha | DZF93_02600 | Not Available | Negative | 541827 - 545339 | 129388.0 |
| rlua family pseudouridine synthase | DZF93_02605 | Not Available | Negative | 545416 - 546333 | 32966.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
