Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | DZF93_02400 | Not Available | Negative | 499411 - 500184 | 27191.4 |
| hypothetical protein | DZF93_02405 | Not Available | Negative | 500181 - 500702 | 18200.8 |
| single-stranded dna-binding protein | DZF93_02410 | Not Available | Negative | 500705 - 501082 | 13292.6 |
| sdr family oxidoreductase | DZF93_02415 | Not Available | Negative | 502220 - 502873 | 22660.5 |
| phosphate acetyltransferase | DZF93_02425 | Not Available | Positive | 503106 - 505223 | 74670.6 |
| acetate kinase | DZF93_02430 | Not Available | Positive | 505278 - 506468 | 41989.7 |
| duf998 domain-containing protein | DZF93_02440 | Not Available | Positive | 510165 - 510370 | 6932.59 |
| copper transporter | DZF93_02445 | Not Available | Negative | 510426 - 512405 | 70633.5 |
| integration host factor | DZF93_02450 | Not Available | Negative | 512528 - 512815 | 9679.55 |
| 30s ribosomal protein s14 | DZF93_02455 | Not Available | Negative | 512947 - 513252 | 11479.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
