Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | DZF93_02040 | Not Available | Negative | 422359 - 423270 | 33946.9 |
| iron-sulfur cluster insertion protein erpa | DZF93_02045 | Not Available | Negative | 423395 - 423757 | 12905.0 |
| dipeptidase | DZF93_02050 | Not Available | Negative | 423892 - 425313 | 49189.6 |
| duf3043 domain-containing protein | DZF93_02055 | Not Available | Positive | 425354 - 425947 | 21877.7 |
| quinone-dependent dihydroorotate dehydrogenase | DZF93_02060 | Not Available | Negative | 426015 - 427049 | 36578.3 |
| transcriptional regulator nrdr | DZF93_02065 | Not Available | Negative | 427113 - 427586 | 17312.5 |
| histidinol dehydrogenase | DZF93_02070 | Not Available | Negative | 427604 - 428056 | 15506.1 |
| quinone oxidoreductase | DZF93_02075 | Not Available | Negative | 428057 - 428396 | 11651.9 |
| hypothetical protein | DZF93_02080 | Not Available | Negative | 428428 - 429084 | 24109.2 |
| hypothetical protein | DZF93_02085 | Not Available | Negative | 429086 - 429724 | 21414.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
