Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DZF93_21105 | Not Available | Positive | 3209980 - 3210265 | 9568.31 |
| abc transporter atp-binding protein | DZF93_21110 | Not Available | Positive | 3210266 - 3210550 | 10444.9 |
| nad(p)h-quinone oxidoreductase | DZF93_21115 | Not Available | Negative | 3210551 - 3210835 | 9436.49 |
| methionyl-trna formyltransferase | DZF93_21120 | Not Available | Negative | 3210836 - 3210964 | 4519.68 |
| aminopeptidase p family protein | DZF93_21125 | Not Available | Negative | 3211121 - 3211404 | 9362.73 |
| rna polymerase subunit sigma-70 | DZF93_21130 | Not Available | Positive | 3211405 - 3211688 | 10504.6 |
| histidine kinase | DZF93_21135 | Not Available | Negative | 3211689 - 3211972 | 9300.91 |
| mycothiol biosynthesis protein | DZF93_21140 | Not Available | Negative | 3211973 - 3212255 | 9391.98 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | DZF93_21145 | Not Available | Positive | 3212256 - 3212430 | 5931.61 |
| fpg/nei family dna glycosylase | DZF93_21155 | Not Available | Negative | 3212822 - 3213103 | 10367.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
