Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt transporter | DZF93_20955 | Not Available | Negative | 3201203 - 3201501 | 10362.3 |
| duf4244 domain-containing protein | DZF93_20960 | Not Available | Positive | 3201514 - 3201723 | 7306.95 |
| tetr family transcriptional regulator | DZF93_20965 | Not Available | Negative | 3201801 - 3202048 | 8846.46 |
| dna-binding response regulator | DZF93_20970 | Not Available | Negative | 3202109 - 3202395 | 9875.25 |
| hypothetical protein | DZF93_20975 | Not Available | Negative | 3202396 - 3202692 | 10367.2 |
| glycosyl hydrolase | DZF93_20980 | Not Available | Positive | 3202693 - 3202988 | 10361.2 |
| glycosyltransferase | DZF93_20985 | Not Available | Positive | 3202989 - 3203283 | 10076.4 |
| diaminopimelate decarboxylase | DZF93_20990 | Not Available | Positive | 3203284 - 3203448 | 5672.61 |
| homoserine dehydrogenase | DZF93_20995 | Not Available | Positive | 3203445 - 3203578 | 4938.13 |
| malonate decarboxylase subunit alpha | DZF93_21000 | Not Available | Positive | 3203579 - 3203770 | 6808.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
