Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family transcriptional regulator | DZF93_20900 | Not Available | Negative | 3198224 - 3198498 | 9364.59 |
| duf4350 domain-containing protein | DZF93_20905 | Not Available | Negative | 3198801 - 3199102 | 10004.7 |
| hypothetical protein | DZF93_20910 | Not Available | Positive | 3199147 - 3199404 | 8644.99 |
| hypothetical protein | DZF93_20915 | Not Available | Positive | 3199405 - 3199705 | 10151.0 |
| sensor histidine kinase | DZF93_20920 | Not Available | Negative | 3199706 - 3199907 | 6894.23 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DZF93_20930 | Not Available | Negative | 3200006 - 3200305 | 10411.4 |
| fe(3+)-siderophore abc transporter permease | DZF93_20935 | Not Available | Positive | 3200306 - 3200604 | 9511.81 |
| amidohydrolase | DZF93_20940 | Not Available | Negative | 3200605 - 3200903 | 10612.5 |
| malonate decarboxylase holo-acp synthase | DZF93_20945 | Not Available | Positive | 3200904 - 3201048 | 4771.54 |
| malonate decarboxylase subunit epsilon | DZF93_20950 | Not Available | Positive | 3201045 - 3201202 | 5406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
