Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_20615 | Not Available | Negative | 3180283 - 3180607 | 11079.8 |
| abc transporter permease subunit | DZF93_20620 | Not Available | Positive | 3180608 - 3180931 | 10435.2 |
| histidine kinase | DZF93_20625 | Not Available | Negative | 3180932 - 3181255 | 11263.3 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DZF93_20630 | Not Available | Negative | 3181256 - 3181483 | 7760.36 |
| carboxylesterase/lipase family protein | DZF93_20640 | Not Available | Positive | 3181904 - 3182226 | 11609.3 |
| had family hydrolase | DZF93_20645 | Not Available | Negative | 3182342 - 3182549 | 6968.02 |
| smp-30/gluconolactonase/lre family protein | DZF93_20650 | Not Available | Negative | 3182873 - 3183141 | 9410.13 |
| folate-binding protein | DZF93_20655 | Not Available | Negative | 3183285 - 3183518 | 8002.59 |
| thioredoxin domain-containing protein | DZF93_20660 | Not Available | Positive | 3183519 - 3183777 | 8756.28 |
| thioesterase | DZF93_20665 | Not Available | Negative | 3183841 - 3184162 | 11544.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
