Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease subunit pstc | DZF93_01935 | Not Available | Negative | 396238 - 397134 | 31365.2 |
| phosphate abc transporter substrate-binding protein psts | DZF93_01940 | Not Available | Negative | 397348 - 398445 | 37008.9 |
| nudix hydrolase | DZF93_01945 | Not Available | Negative | 398646 - 399596 | 34063.5 |
| rna degradosome polyphosphate kinase | DZF93_01950 | Not Available | Negative | 399629 - 401812 | 81677.8 |
| gnat family n-acetyltransferase | DZF93_01955 | Not Available | Negative | 401906 - 402351 | 15846.5 |
| duf3159 domain-containing protein | DZF93_01960 | Not Available | Positive | 402352 - 403050 | 23936.9 |
| aconitate hydratase acna | DZF93_01965 | Not Available | Positive | 403297 - 406110 | 100960.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DZF93_01970 | Not Available | Positive | 406225 - 408177 | 70405.4 |
| 3-hydroxyacyl-coa dehydrogenase | DZF93_01975 | Not Available | Negative | 408241 - 410370 | 76480.0 |
| mfs transporter | DZF93_01985 | Not Available | Negative | 410941 - 411451 | 17086.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
