Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts-dependent dihydroxyacetone kinase phosphotransferase subunit dham | DZF93_20035 | Not Available | Positive | 3140287 - 3140625 | 10949.0 |
| hypothetical protein | DZF93_20040 | Not Available | Negative | 3140772 - 3140996 | 6823.88 |
| esterase | DZF93_20045 | Not Available | Negative | 3140997 - 3141367 | 12769.2 |
| hydroxymethylbilane synthase | DZF93_20050 | Not Available | Positive | 3141368 - 3141738 | 13194.6 |
| hypothetical protein | DZF93_20060 | Not Available | Positive | 3142109 - 3142478 | 12708.1 |
| duf4981 domain-containing protein | DZF93_20065 | Not Available | Positive | 3142479 - 3142847 | 12646.8 |
| peptidase | DZF93_20070 | Not Available | Positive | 3142848 - 3143005 | 5212.2 |
| atp-binding protein | DZF93_20075 | Not Available | Negative | 3143216 - 3143582 | 12978.5 |
| beta-galactosidase | DZF93_20080 | Not Available | Negative | 3143583 - 3143948 | 13246.6 |
| glycosyltransferase | DZF93_20085 | Not Available | Negative | 3143949 - 3144313 | 12235.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
