Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_18855 | Not Available | Positive | 3048438 - 3048877 | 15461.0 |
| serine protease | DZF93_18860 | Not Available | Negative | 3048930 - 3049111 | 5907.37 |
| d-alanine--d-alanine ligase | DZF93_18865 | Not Available | Negative | 3049467 - 3049912 | 15420.3 |
| pilus assembly protein | DZF93_18870 | Not Available | Positive | 3049913 - 3050403 | 16391.2 |
| glycosyltransferase family 2 protein | DZF93_18875 | Not Available | Positive | 3050404 - 3050892 | 16774.6 |
| multidrug transporter | DZF93_18880 | Not Available | Negative | 3050968 - 3051189 | 7869.86 |
| response regulator | DZF93_18885 | Not Available | Negative | 3051381 - 3051742 | 12886.5 |
| abc transporter substrate-binding protein | DZF93_18890 | Not Available | Positive | 3051868 - 3052354 | 17032.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | DZF93_18900 | Not Available | Positive | 3052842 - 3053328 | 16786.6 |
| aaa family atpase | DZF93_18905 | Not Available | Negative | 3053329 - 3053471 | 4800.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
