Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | DZF93_18695 | Not Available | Positive | 3035882 - 3036390 | 17671.8 |
| tetr family transcriptional regulator | DZF93_18700 | Not Available | Negative | 3036391 - 3036684 | 10730.7 |
| bioy family transporter | DZF93_18705 | Not Available | Positive | 3036761 - 3036898 | 4716.86 |
| fad-dependent oxidoreductase | DZF93_18715 | Not Available | Negative | 3037407 - 3037650 | 8225.87 |
| abc transporter permease subunit | DZF93_18720 | Not Available | Negative | 3037647 - 3037914 | 9199.59 |
| thiamine-phosphate pyrophosphorylase | DZF93_18725 | Not Available | Positive | 3038005 - 3038421 | 14088.1 |
| duf305 domain-containing protein | DZF93_18730 | Not Available | Negative | 3038422 - 3038521 | 3325.98 |
| dienelactone hydrolase | DZF93_18735 | Not Available | Positive | 3038577 - 3038928 | 12462.9 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DZF93_18740 | Not Available | Negative | 3038929 - 3039073 | 4912.73 |
| nitroreductase | DZF93_18750 | Not Available | Positive | 3039450 - 3039941 | 17811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
