Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DZF93_18590 | Not Available | Positive | 3026633 - 3027151 | 17087.2 |
| thiamine-phosphate pyrophosphorylase | DZF93_18595 | Not Available | Negative | 3027152 - 3027669 | 17124.5 |
| rok family protein | DZF93_18600 | Not Available | Negative | 3027670 - 3027896 | 7665.08 |
| srpbcc domain-containing protein | DZF93_18605 | Not Available | Positive | 3028072 - 3028187 | 4015.55 |
| alcaligin biosynthesis protein | DZF93_18615 | Not Available | Positive | 3028739 - 3029222 | 17715.2 |
| transcription-repair coupling factor | DZF93_18620 | Not Available | Positive | 3029304 - 3029738 | 15684.0 |
| nad(p)-dependent oxidoreductase | DZF93_18625 | Not Available | Positive | 3029776 - 3030253 | 16101.4 |
| 4'-phosphopantetheinyl transferase | DZF93_18630 | Not Available | Positive | 3030254 - 3030745 | 17789.5 |
| glycosyltransferase | DZF93_18635 | Not Available | Positive | 3030769 - 3031282 | 18033.8 |
| ntp pyrophosphohydrolase | DZF93_18640 | Not Available | Negative | 3031283 - 3031444 | 5877.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
