Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DZF93_01680 | Not Available | Negative | 344683 - 345135 | 16118.5 |
| 30s ribosomal protein s18 | DZF93_01685 | Not Available | Negative | 345147 - 345410 | 9434.65 |
| single-stranded dna-binding protein | DZF93_01690 | Not Available | Negative | 345447 - 346001 | 19168.8 |
| 30s ribosomal protein s6 | DZF93_01695 | Not Available | Negative | 346005 - 346469 | 16413.4 |
| cca trna nucleotidyltransferase | DZF93_01700 | Not Available | Negative | 346633 - 348063 | 53057.4 |
| sortase | DZF93_01705 | Not Available | Positive | 348155 - 349149 | 33285.1 |
| glycosyltransferase family 1 protein | DZF93_01710 | Not Available | Positive | 349150 - 349368 | 8049.53 |
| pkd domain-containing protein | DZF93_01715 | Not Available | Positive | 349418 - 355312 | 202000.0 |
| hypothetical protein | DZF93_01720 | Not Available | Positive | 355474 - 356829 | 46082.6 |
| polysaccharide biosynthesis tyrosine autokinase | DZF93_01725 | Not Available | Positive | 356826 - 358213 | 48590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
