Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | DZF93_17550 | Not Available | Positive | 2923764 - 2924416 | 22210.8 |
| glyoxalase | DZF93_17565 | Not Available | Positive | 2925804 - 2926199 | 14333.7 |
| sdr family oxidoreductase | DZF93_17570 | Not Available | Negative | 2926423 - 2927015 | 20182.4 |
| eama family transporter | DZF93_17575 | Not Available | Negative | 2927016 - 2927662 | 21951.8 |
| atp-binding cassette domain-containing protein | DZF93_17580 | Not Available | Positive | 2927829 - 2928309 | 17807.2 |
| crossover junction endodeoxyribonuclease ruvc | DZF93_17585 | Not Available | Positive | 2928310 - 2928386 | 2449.84 |
| holliday junction branch migration protein ruva | DZF93_17590 | Not Available | Positive | 2928403 - 2928954 | 18977.9 |
| m50 family peptidase | DZF93_17595 | Not Available | Positive | 2928955 - 2929581 | 21170.6 |
| protein translocase subunit secd | DZF93_17600 | Not Available | Negative | 2929599 - 2930061 | 15581.6 |
| non-ribosomal peptide synthetase | DZF93_17605 | Not Available | Negative | 2930243 - 2930885 | 22292.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
