Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DZF93_17205 | Not Available | Negative | 2887669 - 2887968 | 10296.5 |
| dna repair protein recn | DZF93_17215 | Not Available | Negative | 2888667 - 2889363 | 25064.2 |
| cysteine--trna ligase | DZF93_17220 | Not Available | Positive | 2889364 - 2889750 | 13552.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DZF93_17225 | Not Available | Positive | 2889740 - 2890060 | 11498.5 |
| hypothetical protein | DZF93_17230 | Not Available | Negative | 2890061 - 2890757 | 23591.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DZF93_17235 | Not Available | Positive | 2890918 - 2891451 | 19003.9 |
| hypothetical protein | DZF93_17240 | Not Available | Positive | 2891452 - 2892102 | 23247.8 |
| duf4244 domain-containing protein | DZF93_17245 | Not Available | Negative | 2892146 - 2892373 | 7230.5 |
| pilus assembly protein | DZF93_17250 | Not Available | Negative | 2892498 - 2892839 | 11348.1 |
| mate family efflux transporter | DZF93_17255 | Not Available | Positive | 2892840 - 2893341 | 16874.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
