Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DZF93_16840 | Not Available | Positive | 2848006 - 2848739 | 25175.2 |
| sigma-70 family rna polymerase sigma factor | DZF93_16845 | Not Available | Positive | 2848740 - 2849508 | 27957.4 |
| hth domain-containing protein | DZF93_16850 | Not Available | Negative | 2849509 - 2849783 | 10214.9 |
| pts sugar transporter subunit iiabc | DZF93_16855 | Not Available | Positive | 2849994 - 2850276 | 9499.33 |
| inositol monophosphatase | DZF93_16865 | Not Available | Negative | 2851044 - 2851760 | 25002.5 |
| heat repeat domain-containing protein | DZF93_16870 | Not Available | Positive | 2851811 - 2852082 | 9652.52 |
| merr family transcriptional regulator | DZF93_16875 | Not Available | Positive | 2852135 - 2852577 | 16198.3 |
| nmra family protein | DZF93_16880 | Not Available | Positive | 2852578 - 2853302 | 25800.5 |
| biotin-independent malonate decarboxylase subunit gamma | DZF93_16885 | Not Available | Positive | 2853345 - 2854040 | 23500.9 |
| serine protease | DZF93_16890 | Not Available | Negative | 2854110 - 2854873 | 25964.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
