Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DZF93_16675 | Not Available | Positive | 2827636 - 2828433 | 29122.2 |
| sensor histidine kinase | DZF93_16680 | Not Available | Positive | 2828434 - 2829230 | 28645.6 |
| mfs transporter | DZF93_16685 | Not Available | Positive | 2829292 - 2830026 | 24956.7 |
| hypothetical protein | DZF93_16690 | Not Available | Negative | 2830027 - 2830341 | 11007.2 |
| guab1 family imp dehydrogenase-related protein | DZF93_16695 | Not Available | Positive | 2830521 - 2830822 | 10701.8 |
| pepsy domain-containing protein | DZF93_16700 | Not Available | Negative | 2830823 - 2831618 | 27566.3 |
| l-serine ammonia-lyase | DZF93_16705 | Not Available | Positive | 2831619 - 2832258 | 21588.7 |
| hypothetical protein | DZF93_16710 | Not Available | Positive | 2832412 - 2833204 | 26663.2 |
| duf1275 domain-containing protein | DZF93_16725 | Not Available | Negative | 2833906 - 2833994 | 2959.44 |
| phytoene desaturase | DZF93_16730 | Not Available | Positive | 2833995 - 2834783 | 28638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
