Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 322610 - 322682 | Not Available |
| hypothetical protein | DZF93_01580 | Not Available | Positive | 324625 - 325140 | 19034.5 |
| gntp family permease | DZF93_01585 | Not Available | Positive | 325681 - 327081 | 47848.8 |
| hypothetical protein | DZF93_01590 | Not Available | Positive | 327213 - 328802 | 54219.7 |
| xanthorhodopsin | DZF93_01595 | Not Available | Positive | 329028 - 329855 | 30161.1 |
| pyridoxamine 5'-phosphate oxidase | DZF93_01600 | Not Available | Negative | 329874 - 330123 | 8969.42 |
| hypothetical protein | DZF93_01610 | Not Available | Negative | 331502 - 332173 | 21767.6 |
| marr family transcriptional regulator | DZF93_01615 | Not Available | Positive | 332403 - 332897 | 17364.7 |
| nudix domain-containing protein | DZF93_01620 | Not Available | Positive | 332912 - 333295 | 13803.6 |
| hypothetical protein | DZF93_01625 | Not Available | Negative | 333300 - 334052 | 27084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
