Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DZF93_16180 | Not Available | Positive | 2765123 - 2765992 | 29847.7 |
| glycosyltransferase family 2 protein | DZF93_16185 | Not Available | Positive | 2766012 - 2766900 | 29565.6 |
| m4 family peptidase | DZF93_16190 | Not Available | Negative | 2766901 - 2767789 | 31320.8 |
| mfs transporter | DZF93_16195 | Not Available | Negative | 2767790 - 2768584 | 27283.2 |
| Trna-leu | Not Available | Not Available | Positive | 2769203 - 2769287 | Not Available |
| d-cysteine desulfhydrase family protein | DZF93_16210 | Not Available | Positive | 2769351 - 2769534 | 6900.39 |
| deoxyribose-phosphate aldolase | DZF93_16215 | Not Available | Negative | 2769678 - 2770418 | 25600.6 |
| hypothetical protein | DZF93_16220 | Not Available | Positive | 2770419 - 2771206 | 26071.1 |
| lysr family transcriptional regulator | DZF93_16225 | Not Available | Negative | 2771436 - 2772180 | 26969.8 |
| glycosyltransferase | DZF93_16230 | Not Available | Positive | 2772181 - 2773059 | 30361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
