Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | DZF93_16015 | Not Available | Positive | 2740697 - 2741518 | 28206.1 |
| lysr family transcriptional regulator | DZF93_16020 | Not Available | Negative | 2741668 - 2742444 | 27226.6 |
| luxr family transcriptional regulator | DZF93_16025 | Not Available | Negative | 2742445 - 2742877 | 15173.2 |
| marr family transcriptional regulator | DZF93_16030 | Not Available | Negative | 2743370 - 2743706 | 11972.3 |
| luxr family transcriptional regulator | DZF93_16035 | Not Available | Positive | 2743860 - 2744294 | 15595.3 |
| rok family protein | DZF93_16040 | Not Available | Negative | 2744324 - 2745190 | 30298.5 |
| gntr family transcriptional regulator | DZF93_16045 | Not Available | Positive | 2745344 - 2746030 | 25262.2 |
| phosphoenolpyruvate--protein phosphotransferase | DZF93_16050 | Not Available | Positive | 2746143 - 2747053 | 31145.2 |
| tyrosine-protein phosphatase | DZF93_16060 | Not Available | Positive | 2747982 - 2748898 | 30971.9 |
| gamma subclass chorismate mutase aroq | DZF93_16065 | Not Available | Positive | 2749084 - 2749674 | 20262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
