Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DZF93_15690 | Not Available | Negative | 2705102 - 2705361 | 9584.42 |
| dna-directed rna polymerase subunit beta | DZF93_15695 | Not Available | Negative | 2705918 - 2706086 | 5875.91 |
| mfs transporter | DZF93_15700 | Not Available | Negative | 2706087 - 2706339 | 8546.87 |
| mfs transporter | DZF93_15705 | Not Available | Negative | 2706320 - 2707066 | 25533.1 |
| sugar abc transporter atp-binding protein | DZF93_15710 | Not Available | Positive | 2707072 - 2708056 | 34845.2 |
| yihy/virulence factor brkb family protein | DZF93_15715 | Not Available | Negative | 2708057 - 2709040 | 35391.8 |
| dihydroxyacetone kinase subunit dhak | DZF93_15720 | Not Available | Positive | 2709041 - 2709548 | 17869.5 |
| dihydroxyacetone kinase subunit l | DZF93_15725 | Not Available | Positive | 2709552 - 2710022 | 15625.3 |
| anthranilate synthase component i | DZF93_15730 | Not Available | Negative | 2710023 - 2710437 | 14648.3 |
| phosphoribosyl-amp cyclohydrolase | DZF93_15735 | Not Available | Negative | 2710434 - 2710832 | 14383.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
