Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rna methyltransferase | DZF93_14950 | Not Available | Negative | 2612126 - 2612399 | 9679.59 |
| nad-dependent epimerase/dehydratase family protein | DZF93_14955 | Not Available | Negative | 2612400 - 2613190 | 28164.9 |
| duf2017 family protein | DZF93_14960 | Not Available | Negative | 2613305 - 2613531 | 8148.58 |
| tryptophan-rich sensory protein | DZF93_14965 | Not Available | Negative | 2613532 - 2614141 | 21064.0 |
| duf2207 domain-containing protein | DZF93_14975 | Not Available | Negative | 2614744 - 2615794 | 35813.2 |
| cupin domain-containing protein | DZF93_14980 | Not Available | Positive | 2615974 - 2616864 | 31677.1 |
| glycosyl transferase | DZF93_14985 | Not Available | Negative | 2616926 - 2617910 | 36127.5 |
| carboxylesterase/lipase family protein | DZF93_15000 | Not Available | Positive | 2619186 - 2619340 | 5558.66 |
| redox-sensitive transcriptional activator soxr | DZF93_15005 | Not Available | Negative | 2619384 - 2619794 | 15253.5 |
| ferredoxin family protein | DZF93_15010 | Not Available | Positive | 2619979 - 2620299 | 11540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
