Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | DZF93_14890 | Not Available | Negative | 2603268 - 2603718 | 15924.2 |
| quinone oxidoreductase | DZF93_14895 | Not Available | Negative | 2603753 - 2604415 | 22936.2 |
| glycoside hydrolase family 5 protein | DZF93_14900 | Not Available | Negative | 2604416 - 2604572 | 5452.6 |
| hypothetical protein | DZF93_14905 | Not Available | Positive | 2605135 - 2605482 | 12661.9 |
| duf429 domain-containing protein | DZF93_14910 | Not Available | Negative | 2605564 - 2606112 | 19695.5 |
| aspartate ammonia-lyase | DZF93_14915 | Not Available | Positive | 2606218 - 2606710 | 17638.7 |
| co-chaperone ybbn | DZF93_14920 | Not Available | Negative | 2606711 - 2606851 | 4307.04 |
| hypothetical protein | DZF93_14925 | Not Available | Negative | 2606848 - 2607854 | 34354.1 |
| d-alanyl-d-alanine carboxypeptidase | DZF93_14940 | Not Available | Positive | 2610131 - 2611265 | 38227.9 |
| dna-binding response regulator | DZF93_14945 | Not Available | Negative | 2611322 - 2612026 | 24489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
