Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DZF93_14665 | Not Available | Positive | 2570496 - 2571059 | 19673.1 |
| hypothetical protein | DZF93_14670 | Not Available | Positive | 2571150 - 2571682 | 19390.1 |
| abc transporter permease subunit | DZF93_14675 | Not Available | Positive | 2571844 - 2572868 | 35225.6 |
| abc transporter permease | DZF93_14680 | Not Available | Positive | 2572869 - 2573485 | 20913.8 |
| duf3039 domain-containing protein | DZF93_14685 | Not Available | Positive | 2573539 - 2573826 | 10622.7 |
| nicotinate phosphoribosyltransferase | DZF93_14690 | Not Available | Negative | 2573851 - 2574054 | 7030.17 |
| protein translocase subunit secf | DZF93_14695 | Not Available | Negative | 2574071 - 2575081 | 35717.0 |
| hypothetical protein | DZF93_14700 | Not Available | Negative | 2575241 - 2575492 | 8326.06 |
| bluf domain-containing protein | DZF93_14705 | Not Available | Negative | 2575573 - 2575992 | 15780.5 |
| hypothetical protein | DZF93_14715 | Not Available | Positive | 2577425 - 2577610 | 6301.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
