Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_14090 | Not Available | Negative | 2489218 - 2489505 | 9938.0 |
| acyl-coa thioesterase ii | DZF93_14095 | Not Available | Positive | 2489589 - 2490494 | 33251.2 |
| short-chain dehydrogenase | DZF93_14100 | Not Available | Negative | 2490525 - 2490746 | 7599.92 |
| 3-dehydroquinate synthase | DZF93_14105 | Not Available | Negative | 2490743 - 2491804 | 38060.1 |
| nadp-dependent oxidoreductase | DZF93_14110 | Not Available | Positive | 2492005 - 2493024 | 35663.2 |
| yihy/virulence factor brkb family protein | DZF93_14115 | Not Available | Negative | 2492969 - 2493135 | 6356.37 |
| smc family atpase | DZF93_14120 | Not Available | Negative | 2493136 - 2493805 | 23815.2 |
| exonuclease sbccd subunit d | DZF93_14125 | Not Available | Negative | 2493805 - 2494438 | 22363.3 |
| proline racemase | DZF93_14130 | Not Available | Positive | 2494535 - 2495536 | 35832.9 |
| aldehyde dehydrogenase (nadp(+)) | DZF93_14135 | Not Available | Positive | 2495563 - 2495740 | 5911.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
