Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | DZF93_13305 | Not Available | Negative | 2372730 - 2374016 | 44662.0 |
| endolytic transglycosylase mltg | DZF93_13310 | Not Available | Positive | 2374241 - 2375248 | 35083.1 |
| shikimate dehydrogenase | DZF93_13315 | Not Available | Positive | 2375241 - 2375657 | 14366.3 |
| duf4245 domain-containing protein | DZF93_13330 | Not Available | Negative | 2376177 - 2376884 | 24546.4 |
| exodeoxyribonuclease vii small subunit | DZF93_13335 | Not Available | Negative | 2376887 - 2377132 | 8616.93 |
| had family hydrolase | DZF93_13340 | Not Available | Negative | 2377176 - 2377502 | 11816.0 |
| coproporphyrinogen iii oxidase | DZF93_13345 | Not Available | Positive | 2377578 - 2378691 | 39910.9 |
| peptide abc transporter substrate-binding protein | DZF93_13360 | Not Available | Negative | 2380207 - 2380960 | 25789.8 |
| dna primase | DZF93_13365 | Not Available | Negative | 2381162 - 2381717 | 20007.9 |
| sgnh/gdsl hydrolase family protein | DZF93_13370 | Not Available | Negative | 2381718 - 2382385 | 22588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
