Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | DZF93_13145 | Not Available | Positive | 2350418 - 2350873 | 16580.7 |
| deoxyribodipyrimidine photo-lyase | DZF93_13150 | Not Available | Negative | 2350874 - 2351524 | 23856.8 |
| glycosyltransferase | DZF93_13155 | Not Available | Positive | 2351670 - 2352448 | 27058.0 |
| hypothetical protein | DZF93_13160 | Not Available | Negative | 2352565 - 2352759 | 6896.82 |
| hypothetical protein | DZF93_13165 | Not Available | Negative | 2352831 - 2353430 | 19833.5 |
| n-acetyltransferase | DZF93_13170 | Not Available | Positive | 2353628 - 2354020 | 13735.3 |
| histidine--trna ligase | DZF93_13175 | Not Available | Negative | 2354023 - 2354742 | 25782.0 |
| tetr/acrr family transcriptional regulator | DZF93_13180 | Not Available | Negative | 2354755 - 2355390 | 23775.3 |
| lysr family transcriptional regulator | DZF93_13185 | Not Available | Negative | 2355596 - 2355775 | 6659.06 |
| mfs transporter | DZF93_13190 | Not Available | Positive | 2355931 - 2357167 | 43087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
