Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | DZF93_13040 | Not Available | Positive | 2335786 - 2336493 | 25064.7 |
| duf418 domain-containing protein | DZF93_13045 | Not Available | Positive | 2336494 - 2336817 | 10907.6 |
| sdr family oxidoreductase | DZF93_13050 | Not Available | Negative | 2336804 - 2337934 | 41496.4 |
| lytr family transcriptional regulator | DZF93_13055 | Not Available | Positive | 2338116 - 2338641 | 17742.9 |
| cold-shock protein | DZF93_13060 | Not Available | Positive | 2338869 - 2339087 | 7809.23 |
| molecular chaperone groel | DZF93_13065 | Not Available | Positive | 2339281 - 2339728 | 15761.9 |
| class i sam-dependent methyltransferase | DZF93_13070 | Not Available | Positive | 2339729 - 2339867 | 4868.74 |
| atp-dependent rna helicase | DZF93_13075 | Not Available | Positive | 2339928 - 2341337 | 51209.1 |
| histidine kinase | DZF93_13080 | Not Available | Positive | 2341338 - 2342081 | 25378.1 |
| dna-binding response regulator | DZF93_13085 | Not Available | Positive | 2342078 - 2342827 | 27329.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
