Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | DZF93_12935 | Not Available | Negative | 2320197 - 2321627 | 50170.9 |
| fructosamine kinase | DZF93_12940 | Not Available | Negative | 2321740 - 2321909 | 5601.55 |
| sugar phosphate isomerase/epimerase | DZF93_12945 | Not Available | Positive | 2322057 - 2322932 | 32316.8 |
| monooxygenase | DZF93_12950 | Not Available | Positive | 2323113 - 2323392 | 9917.59 |
| mfs transporter | DZF93_12955 | Not Available | Positive | 2323393 - 2323614 | 7234.63 |
| hypothetical protein | DZF93_12960 | Not Available | Negative | 2323691 - 2323945 | 8820.02 |
| 3-isopropylmalate dehydrogenase | DZF93_12965 | Not Available | Positive | 2324058 - 2325044 | 34554.2 |
| hypothetical protein | DZF93_12970 | Not Available | Positive | 2325045 - 2326236 | 42751.7 |
| duf3117 domain-containing protein | DZF93_12975 | Not Available | Positive | 2326392 - 2326565 | 5886.18 |
| extracellular solute-binding protein | DZF93_12985 | Not Available | Positive | 2326863 - 2328185 | 46374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
