Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | DZF93_01210 | Not Available | Positive | 248249 - 248483 | 7934.38 |
| preprotein translocase subunit secg | DZF93_01215 | Not Available | Positive | 248624 - 248875 | 8682.08 |
| rna polymerase-binding protein rbpa | DZF93_01220 | Not Available | Positive | 248887 - 249255 | 13311.6 |
| 6-phosphogluconolactonase | DZF93_01225 | Not Available | Negative | 249435 - 250205 | 27455.6 |
| opca protein | DZF93_01230 | Not Available | Negative | 250202 - 251200 | 35407.9 |
| glucose-6-phosphate dehydrogenase | DZF93_01235 | Not Available | Negative | 251197 - 252738 | 57906.6 |
| glucose-6-phosphate isomerase | DZF93_01240 | Not Available | Negative | 252777 - 254372 | 54750.8 |
| transaldolase | DZF93_01245 | Not Available | Negative | 254369 - 255484 | 39820.8 |
| transketolase | DZF93_01250 | Not Available | Negative | 255636 - 257726 | 75068.1 |
| protoheme ix farnesyltransferase | DZF93_01255 | Not Available | Positive | 257900 - 258820 | 33697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
