Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2268756 - 2268829 | Not Available |
| rne/rng family ribonuclease | DZF93_12615 | Not Available | Positive | 2269062 - 2270792 | 63225.2 |
| duf418 domain-containing protein | DZF93_12620 | Not Available | Negative | 2270793 - 2271461 | 22723.0 |
| abc transporter atp-binding protein | DZF93_12625 | Not Available | Positive | 2271598 - 2272512 | 32383.4 |
| type i dna topoisomerase | DZF93_12630 | Not Available | Negative | 2272524 - 2274024 | 55146.3 |
| monooxygenase | DZF93_12635 | Not Available | Negative | 2274254 - 2275455 | 43496.2 |
| marr family transcriptional regulator | DZF93_12640 | Not Available | Positive | 2275566 - 2275983 | 14891.6 |
| abc transporter atp-binding protein | DZF93_12645 | Not Available | Negative | 2275984 - 2276905 | 33416.4 |
| abc transporter permease | DZF93_12650 | Not Available | Negative | 2276898 - 2277539 | 21980.9 |
| luxr family transcriptional regulator | DZF93_12655 | Not Available | Negative | 2277714 - 2278064 | 11985.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
