Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-sugar mutase | DZF93_12460 | Not Available | Positive | 2244576 - 2246142 | 55947.3 |
| merr family transcriptional regulator | DZF93_12465 | Not Available | Positive | 2246231 - 2246360 | 4768.51 |
| hnh endonuclease | DZF93_12470 | Not Available | Positive | 2246361 - 2246873 | 18887.7 |
| hypothetical protein | DZF93_12475 | Not Available | Positive | 2246982 - 2247362 | 13375.7 |
| amino acid permease | DZF93_12480 | Not Available | Negative | 2247373 - 2248124 | 26526.2 |
| replication-associated recombination protein a | DZF93_12485 | Not Available | Positive | 2248125 - 2248888 | 27439.5 |
| 30s ribosomal protein s4 | DZF93_12490 | Not Available | Positive | 2249138 - 2249767 | 23654.9 |
| sensor histidine kinase | DZF93_12495 | Not Available | Negative | 2249880 - 2251205 | 46087.8 |
| alternate-type signal peptide domain-containing protein | DZF93_12500 | Not Available | Positive | 2251522 - 2251633 | 3534.29 |
| glsb/yeaq/ymge family stress response membrane protein | DZF93_12505 | Not Available | Negative | 2251835 - 2252095 | 8473.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
