Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3' terminal rna ribose 2'-o-methyltransferase hen1 | DZF93_12300 | Not Available | Positive | 2215401 - 2215914 | 18503.8 |
| polynucleotide kinase-phosphatase | DZF93_12305 | Not Available | Positive | 2215911 - 2217249 | 48154.3 |
| sugar abc transporter permease | DZF93_12310 | Not Available | Positive | 2217340 - 2218194 | 30893.0 |
| carbohydrate abc transporter permease | DZF93_12315 | Not Available | Positive | 2218187 - 2219068 | 31144.5 |
| hypothetical protein | DZF93_12320 | Not Available | Negative | 2219172 - 2219375 | 6555.41 |
| ku protein | DZF93_12325 | Not Available | Negative | 2219486 - 2220481 | 36107.3 |
| atp-dependent dna ligase | DZF93_12330 | Not Available | Positive | 2220518 - 2220946 | 16233.4 |
| duf2142 domain-containing protein | DZF93_12335 | Not Available | Negative | 2220947 - 2222324 | 47997.0 |
| arginine--trna ligase | DZF93_12340 | Not Available | Positive | 2222864 - 2224528 | 60428.3 |
| gnat family n-acetyltransferase | DZF93_12345 | Not Available | Positive | 2224795 - 2225286 | 17359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
