Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DZF93_12245 | Not Available | Negative | 2203021 - 2204258 | 42275.0 |
| rhamnogalacturonan lyase | DZF93_12250 | Not Available | Positive | 2204259 - 2206120 | 65756.2 |
| mannose-1-phosphate guanylyltransferase | DZF93_12255 | Not Available | Negative | 2206291 - 2207412 | 39691.5 |
| glycosyltransferase family 1 protein | DZF93_12260 | Not Available | Positive | 2207530 - 2207980 | 16079.4 |
| amidohydrolase | DZF93_12270 | Not Available | Negative | 2208498 - 2209757 | 43973.9 |
| ai-2e family transporter | DZF93_12275 | Not Available | Positive | 2209914 - 2210957 | 35989.3 |
| class ii fructose-bisphosphatase | DZF93_12280 | Not Available | Positive | 2211016 - 2211696 | 23497.0 |
| phosphoenolpyruvate carboxykinase (gtp) | DZF93_12285 | Not Available | Positive | 2211697 - 2213549 | 67349.0 |
| nad kinase | DZF93_12290 | Not Available | Negative | 2213610 - 2214569 | 34654.6 |
| tlya family rna methyltransferase | DZF93_12295 | Not Available | Negative | 2214533 - 2215393 | 29354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
