Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr family transcriptional regulator | DZF93_11495 | Not Available | Negative | 2085510 - 2085632 | 3645.19 |
| hypothetical protein | DZF93_11500 | Not Available | Negative | 2085633 - 2085885 | 8647.72 |
| sdr family nad(p)-dependent oxidoreductase | DZF93_11505 | Not Available | Positive | 2086099 - 2086845 | 26367.4 |
| gfo/idh/moca family oxidoreductase | DZF93_11510 | Not Available | Positive | 2086923 - 2087681 | 25931.1 |
| gtra family protein | DZF93_11515 | Not Available | Positive | 2087861 - 2088331 | 17478.8 |
| exopolysaccharide biosynthesis protein | DZF93_11520 | Not Available | Negative | 2088359 - 2089651 | 45833.3 |
| hypothetical protein | DZF93_11525 | Not Available | Negative | 2090436 - 2091005 | 20563.3 |
| rna methyltransferase | DZF93_11535 | Not Available | Negative | 2091792 - 2092601 | 28717.8 |
| nad-dependent deacetylase | DZF93_11540 | Not Available | Positive | 2092757 - 2093611 | 30489.1 |
| histidine phosphatase family protein | DZF93_11545 | Not Available | Positive | 2093608 - 2093795 | 6506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
