Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_11000 | Not Available | Negative | 1998524 - 1998874 | 12069.0 |
| hypothetical protein | DZF93_11005 | Not Available | Negative | 1998970 - 1999584 | 23168.4 |
| cobalamin biosynthesis protein cobq | DZF93_11010 | Not Available | Negative | 1999593 - 2000519 | 33429.4 |
| siderophore-interacting protein | DZF93_11015 | Not Available | Negative | 2000646 - 2001035 | 13509.2 |
| lipoyl(octanoyl) transferase lipb | DZF93_11020 | Not Available | Positive | 2001130 - 2001831 | 24647.6 |
| lipoyl synthase | DZF93_11025 | Not Available | Positive | 2001828 - 2002817 | 36652.6 |
| rida family protein | DZF93_11035 | Not Available | Negative | 2004858 - 2005019 | 5224.24 |
| histidine--trna ligase | DZF93_11040 | Not Available | Positive | 2005020 - 2005653 | 21541.8 |
| phosphopyruvate hydratase | DZF93_11045 | Not Available | Positive | 2005769 - 2007049 | 44892.8 |
| Tmrna,resume consensus sequence (at 87): tacaactgccaataacaa | Not Available | Not Available | Positive | 2007205 - 2007577 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
