Clavibacter michiganensis subsp. insidiosus strain CFBP 6488

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter michiganensis subsp. insidiosus strain CFBP 6488 is a Gram-positive, rod-shaped bacterium that typically exhibits a cell arrangement in pairs or as single cells. This strain thrives optimally at a temperature of 25.0°C and requires aerobic conditions for growth. The habitat of C. michiganensis subsp. insidiosus is diverse, suggesting a level of ecological versatility that may allow it to occupy various niches within its environment. As an aerobe, this strain relies on oxygen for its metabolic processes, which is indicative of its potential roles in soil or plant-associated environments where oxygen availability is sufficient. In summary, the unique combination of its Gram-positive nature, rod shape, and specific growth requirements may contribute to its ecological interactions, particularly in aerobic environments where it could influence microbial community dynamics or participate in nutrient cycling. Further studies could elucidate its specific ecological functions and interactions within its habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter michiganensis subsp. insidiosus strain CFBP 6488
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter michiganensis subsp. insidiosus strain CFBP 6488

Accession NumberQWEA00000000.1

Gene Summary

Adenine Count

448911 bp

Thymine Count

446878 bp

Guanine Count

1163632 bp

Cytosine Count

1166114 bp

Genome Length

3225538 bp

Protein-coding Genes

3890 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
membrane protein insertase yidcDZF93_00040Not Available-6549 - 751135555.1
membrane protein insertion efficiency factor yiddDZF93_00045Not Available-7522 - 783311346.9
ribonuclease p protein componentDZF93_00050Not Available-7830 - 817112285.1
50s ribosomal protein l34DZF93_00055Not Available-8175 - 83125210.51
chromosomal replication initiator protein dnaaDZF93_00060Not Available+8791 - 1022453255.5
dna polymerase iii subunit betaDZF93_00065Not Available+10788 - 1193941488.3
decarboxylating 6-phosphogluconate dehydrogenaseDZF93_00070Not Available+11960 - 1284731685.8
dna replication/repair protein recfDZF93_00075Not Available+12855 - 1405743086.3
duf721 domain-containing proteinDZF93_00080Not Available+14054 - 1456618516.9
dna topoisomerase (atp-hydrolyzing) subunit bDZF93_00085Not Available+14756 - 1680175380.0

Displaying genes 11 – 20 of 3940 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites