Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DZF93_10305 | Not Available | Negative | 1885773 - 1886483 | 24189.8 |
| duf3099 domain-containing protein | DZF93_10310 | Not Available | Positive | 1886604 - 1887030 | 14981.0 |
| excinuclease abc subunit c | DZF93_10315 | Not Available | Positive | 1887031 - 1887956 | 33988.3 |
| rnase adaptor protein rapz | DZF93_10320 | Not Available | Positive | 1888033 - 1888908 | 31565.9 |
| dna-binding protein whia | DZF93_10325 | Not Available | Positive | 1888938 - 1889457 | 18615.6 |
| endoglucanase | DZF93_10330 | Not Available | Negative | 1889493 - 1890893 | 47507.7 |
| beta-mannanase | DZF93_10335 | Not Available | Negative | 1891004 - 1891880 | 30716.5 |
| glycoside hydrolase family 15 protein | DZF93_10340 | Not Available | Negative | 1892000 - 1893835 | 66649.5 |
| o-acetyl-adp-ribose deacetylase | DZF93_10345 | Not Available | Positive | 1894073 - 1894294 | 7546.95 |
| abc transporter atp-binding protein | DZF93_10350 | Not Available | Positive | 1894426 - 1896243 | 65946.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
